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Overview
Imaging Dynamic Gene Expression in the Brain's Biological Clock
Neural Network Adaption in the Retina
Future Plans
Overview: My lab is interested in understanding how the brain works. Of course, the answer to that broad question can take many forms and encompass many facets of neuroscience, but the aspect of brain function which I find most compelling is neural plasticity - the relatively slow and sustained changes which take place in the brain when we learn, adapt to new levels of stimuli, express daily biological rhythms or shape neural connections during our development. Neural plasticity can be described as a constellation of related mechanisms in which cascades of intracellular signal transduction pathways drive dynamic changes in gene expression which ultimately impact upon the physiological state of neurons, synapses and networks. My laboratory is currently pursuing research in two critical questions in neural plasticity, Imaging Dynamic Gene Expression in the Brain’s Biological Clock and Neural Network Adaptation in the Retina using a variety of cellular and molecular approaches.
Imaging Dynamic Gene Expression in the Brain’s Biological Clock: Genes are the blueprint for life and their regulation determines organismal development, physiology, behavior and disease. The Human Genome Project marks just the beginning of genome-based investigations because the function of the majority of genes, and their links with physiology, are not understood. A critical challenge facing biological science is to devise new approaches for studying gene function so that the promise of the Genome Project can be fulfilled. Of all the tissues of the body, the brain by far exhibits the most intricate and dynamic patterns of gene regulation, yet traditional time-resolved methods used in neuroscience research have focused on recording the electrochemical elements of brain activity not the ongoing patterns of gene activation in living neurons and circuits. My laboratory has developed methods which capture the dynamics of brain activity in the dimension of gene activity and we are using them to study the molecular physiology of the brain’s biological clock . We have produced transgenic mice in which specific gene promoters drive the expression of a short half-life form of Green Fluorescent Protein (Figure 1).

In these mice, the biological clock neurons glow bright green and the intensity of the glow indicates the extent of clock gene activation (Figure 2).
Thus, we can precisely localize biological clock neurons and also read the molecular time on their daily gene expression/physiological clock. This is a generalizable methodology for exploring gene expression dynamics in the living brain and we are currently using these mice to target biological clock neurons for electrophysiology and RT-PCR by their promoter dynamics (Figure 3), and to produce “molecular circuitry maps” of neural function. Click this link to watch our Quick-Time movie.
Neural Network Adaptation in the Retina: A second research emphasis in my laboratory explores the cellular and molecular mechanisms by which retinal neural networks adapt to different levels of illumination. This project, which is in its twelfth year of continuous funding by the NIH, focuses on how transmission at chemical synapses (glutamatergic) and electrical synapses (gap junctions) is modified according to a variety of adaptational signals in retinal circuits (Figure 4).
Whereas previous work has involved the neuromodulators dopamine and nitric oxide, most recently we have been elucidating the actions of zinc, retinioc acid and the retinal biological clock on glutamate receptors and gap junction channels and hemichannels. We have established the basis for a novel action of retinoids in the nervous system by showing that retinoic acid, a widely studied morphogen and metabolite of retinal light adaptation, also acts as a synaptic neuromodulator at retinal electrical synpases (Figure 5).

Strikingly, this action is mediated by a completely novel retinoid receptor mechanism which is non-nuclear in nature and does not involve transcriptional regulation. This new retinoid signaling path apparently increases the resolution of visual signals when sufficient light is available by adjusting synaptic strength in retinal circuits. In addition, we have demonstrated the action of endogenous retinal zinc in modulating the responsiveness of retinal glutamate receptors, (Figure 6). Finally, we are just beginning to apply our Per1::GFP mouse model to the study of retinal biological rhythms, using this preparation to identify populations of retinal neurons that express clock gene rhythms and targeting these populations for neurophysiological recording (Figure 7).
Future Plans: By continuing to study the underlying molecular bases of neural plasticity we hope to contribute to a greater understanding of how specific brain genes and processes mediate organismal perception and behavior. Specifically, my lab will continue to exploit molecular genetic targeting with gene reporters (perhaps making blue, yellow, red and multicolor mice to go with the green) to enable electrophysiological, molecular and imaging experiments directed toward elucidating the function of the visual and circadian systems of the brain.